Websites
June 23, 2025

Understanding Site Structure for SEO and How It Affects Your Website’s Google Rankings

Zach Sean

There’s a moment in almost every project where a client, overwhelmed and slightly frustrated, asks, "Why is my website not showing up on Google?" It’s a fair question, and it usually leads us into a deeper discussion around how search engines see their business. More often than not, the answer ties back to one fundamental, yet often misunderstood SEO concept: site structure. That’s what we’re digging into today.

Site structure is more than just how your menu looks or how pages are linked. It plays a key role in how Google understands your website, how it indexes your content, and—perhaps most importantly—how easy it is for real humans to navigate your digital space. And when you approach web design with SEO in mind from the beginning, especially in tools like Webflow, WordPress, or even the simpler platforms like Wix and Squarespace, every choice you make impacts how effectively your site gets found online.

Understanding Site Structure: A Primer

Think of your website like a bookstore. If there are no signs, no categories, and books are stacked randomly, it will take visitors much longer to find what they want. Some will leave before they find anything. Google operates in the same way. Site structure, when done right, gives both people and search engines a roadmap.

Structured websites make content easier to index, discover, prioritize, and rank. Clean hierarchies, logical page groupings, and concise internal linking all work like properly labeled shelves and signage in our bookstore metaphor. Users feel guided, not lost. Search engines do too.

Here’s the thing: good structure helps SEO, but great structure supports your entire business strategy. Visitors convert more often. Pages are easier to update. Analytics become more meaningful. It’s not just about appeasing the algorithm.

The Three Levels of Site Structure

  • Hierarchical Structure: How pages are grouped and nested - like homepage → services → specific service
  • URL Structure: Clean, consistent page URLs (e.g., /services/web-design, not /page?id=123)
  • Internal Linking: Strategic links between related content to guide users and bots

Why Site Structure Matters for SEO

Search engines don’t see a website the way a human does. They rely on crawl bots to navigate and understand your site. When that structure is clear, bots index more of your content accurately—and faster. When it’s messy or confusing, you risk pages being ignored or misunderstood.

I once worked with a real estate agent in Franklin, Tennessee who had dozens of service area pages buried inside layers of disconnected blog posts. Google was only indexing about 30% of her content. Once we restructured her site with clear parent/child relationships and a tighter internal linking strategy, her indexed pages doubled, and local rankings improved significantly within a month.

From an SEO standpoint, a strong structure achieves:

  • Better crawlability: Search bots can find and index your content faster
  • Prioritization of key pages: Linking patterns signal which pages matter most
  • Stronger ORM (Online Reputation Management): Structured brand pages rank better for your name

This is especially vital when you’re using platforms like Webflow, where you have full control over page hierarchy and classes. By contrast, platforms like Squarespace or Wix often require creative solutions to mimic this kind of precision. That said, high-quality structure is always possible—it just takes a bit more awareness.

Site Structure and Content Silos: Why Grouping Pages Matters

A major part of good structure is creating content silos, or clusters of related pages that live under a common theme or category. Think of these like mini-branches in a tree, each feeding into a main trunk (your homepage or top-level service pages).

For example, for a chiropractor client, we built out silos like this:

  • /services/chiropractic-care
  • /services/back-pain
  • /services/sports-injury

Each of those service subpages linked upward and laterally to related topics. That internal cohesion built authority both for users (who could easily navigate from back pain treatment to general wellness info) and Google (which understood the depth of our topical coverage).

You can do the same for industries like law, home services, or even artists. The key is to build focused content hubs that reinforce each other and keep visitors engaged. That does two things: boosts time on site (which is good for SEO indirectly), and reduces bounce rates.

How to Create Content Silos

  1. Identify 3-5 core service categories or audience types your business serves
  2. Group related pages and posts under those themes
  3. Use category pages as internal “hubs” with links to all related content
  4. Add contextual hyperlinks between pages when natural

This isn’t just a web developer trick—it’s business strategy. You’re building a framework for messaging and visibility, not just navigation.

URL Structures: Why Clean URLs Are a Signal of Trust

I’ve seen URLs like /page/page_1/content/abc123 do way more damage than most people realize. Clean, keyword-focused, human-readable URLs are more than cosmetic—they directly impact how users perceive your brand and how Google evaluates the relevance of your content.

Take these examples:

  • Weak: /services?id=98A45
  • Better: /services
  • Best: /services/webflow-web-design

When a URL directly represents the topic and is cleanly nested inside a hierarchy, it feels trustworthy to users. More importantly, when multiple pages under one section (ex: /services/) follow the same format, Google understands the relationship between them. This reinforces architecture and topical authority. It’s a quiet way of saying, “we know our stuff.”

If you're using Webflow, setting up clean slugs is straightforward. You can control URL structure manually and include logical naming conventions. With WordPress, using permalinks and categories helps, while with Wix or Squarespace, you’ll often need to disable default options that bury the structure in unnecessary layers.

Internal Linking as a Navigation and Authority Tool

Let’s go back to that bookstore analogy. If one book references another you might enjoy, and points you directly to where to find it, you’re far more likely to engage with both. That’s what internal links do.

But here’s what most businesses get wrong: they either ignore internal links or cram sitewide links into footers with no context. The best internal links live inside your content. They’re natural. They’re relevant. They help visitors get closer to what they actually want.

Here’s how we reshaped internal linking for an HVAC business:

  • Linked between /services/furnace-repair and /blog/winter-home-energy-saving-tips
  • Added links from generic location pages to specific city-focused case studies
  • Used descriptive anchor text like “check out our Nashville AC repair results” instead of “click here”

This approach reduced the bounce rate by 18%, increased the average number of page views, and signaled content relevance to Google. Internal links amplify the authority flow from high-ranking pages to newer or harder-to-rank ones, building a healthy ecosystem within your site.

Mobile Navigation Affects Site Structure Too

Even the best-structured desktop site can break down if mobile navigation is lazy. With more than 60% of web traffic now mobile, thinking through how menus stack, how subpages reveal, and whether users can quickly reach top sections is crucial. Google uses mobile-first indexing, so sloppy navigation means diluted crawl performance.

One e-commerce client had a mega menu with dozens of subcategories that were unusable on mobile. Their bounce rate was over 70% on smartphones. We reduced their primary categories from 10 to 4, linked to internal hub pages, and used accordion-style menus. Within two weeks, bounce rates on mobile dropped by 25%, and time on site increased by over 40%.

Even on a simple service site, I’ve found it helpful to test how many taps it takes to get from homepage to a key service page. If it’s more than three, trim the fat.

Managing Site Structure Growth Over Time

As your content grows—blogs, locations, testimonials, case studies—structure needs active management. If you don’t evolve your architecture as you expand, you’ll uncouple relevance, and dilute your domain authority.

Here’s how we approach long-term structure planning for clients:

  • Quarterly audits of top-performing and orphaned pages
  • Redirect or combine thin content into pillar pages
  • Map upcoming blog posts back to pillar topics before publishing
  • Use Ahrefs or SEMrush to find underlinked internal pages

Think of site structure like a garden—left unchecked, it becomes chaotic. But with intentional care, pruning, and new planting, it becomes a thriving ecosystem. As your business grows, marry new content with old structure and continue reinforcing key conversion paths.

Local SEO and Structure Together: A Strategic Advantage

Since a lot of my clients run local businesses, especially in places like Franklin or Nashville, a well-tuned local page structure is foundational. That includes:

  • Location pages using clean URLs like /locations/franklin-tn
  • Unique content on each location page—no copy-paste across cities
  • Internal links from blog posts and services pages to those city pages
  • Embedding GMB map + reviews schema in each location page

When local plumbing client John added unique location pages and integrated them into his structure, his Franklin and Brentwood pages began ranking individually. Before, he'd just had "Service Areas" in a single paragraph across a general page. Once we separated that content and gave it a structural home, traffic doubled within a quarter.

You can’t just “mention” locations. Build content gateways. Structure them intentionally. Give Google something worth ranking.

Conclusion: Structure as Strategy, Not Just SEO

Site structure is easily dismissed as a technical tidbit. But it’s really about strategy, clarity, and long-term growth. Whether you’re running a five-page service site on Squarespace or a hundred-page thought leadership hub on Webflow, the structure is the skeleton that holds everything together.

Clean hierarchies guide your visitors to where they need to go. Logical URLs and categories tell Google what matters. Internal links distribute authority like irrigation pipes feeding new growth. And everything gets framed in a way that supports your voice, your vision, and your long-term performance online.

It’s worth digging deeper, asking better questions, and building smarter paths. Because when structure is solid, everything else becomes easier: SEO, UX, even messaging. As a web designer and strategist, I’ve found that the clients who invest in getting this right early on rarely regret it—and have fewer problems later on.